CRAN Package Check Results for Maintainer ‘Karl Broman <broman at wisc.edu>’

Last updated on 2025-05-09 01:50:31 CEST.

Package	NOTE	OK
aRxiv		13
broman		13
chromer		13
lineup		13
lineup2		13
mbmixture		13
mmconvert		13
negenes	2	11
qtl	3	10
qtl2	3	10
qtl2convert		13
qtl2fst		13
qtlbook	2	11
qtlcharts	2	11
regress	2	11
simcross		13
xoi		13

Package aRxiv

Current CRAN status: OK: 13

Package broman

Current CRAN status: OK: 13

Package chromer

Current CRAN status: OK: 13

Package lineup

Current CRAN status: OK: 13

Package lineup2

Current CRAN status: OK: 13

Package mbmixture

Current CRAN status: OK: 13

Package mmconvert

Current CRAN status: OK: 13

Package negenes

Current CRAN status: NOTE: 2, OK: 11

Version: 1.0-12
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Karl W Broman <broman@wisc.edu>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Found the following URLs which should use \doi (with the DOI name only): File ‘negenes.Rd’: https://doi.org/10.1073/pnas.1231432100 Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package qtl

Current CRAN status: NOTE: 3, OK: 10

Version: 1.70
Check: installed package size
Result: NOTE installed size is 11.5Mb sub-directories of 1Mb or more: R 2.1Mb contrib 3.7Mb doc 3.0Mb libs 1.3Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package qtl2

Current CRAN status: NOTE: 3, OK: 10

Additional issues

gcc-UBSAN

Version: 0.36
Check: installed package size
Result: NOTE installed size is 44.5Mb sub-directories of 1Mb or more: extdata 3.3Mb libs 39.9Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package qtl2convert

Current CRAN status: OK: 13

Package qtl2fst

Current CRAN status: OK: 13

Package qtlbook

Current CRAN status: NOTE: 2, OK: 11

Version: 0.18-8
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Karl W Broman <broman@wisc.edu>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package qtlcharts

Current CRAN status: NOTE: 2, OK: 11

Version: 0.16
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Karl W Broman <broman@wisc.edu>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package regress

Current CRAN status: NOTE: 2, OK: 11

Version: 1.3-21
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Karl W Broman <broman@wisc.edu>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package simcross

Current CRAN status: OK: 13

Package xoi

Current CRAN status: OK: 13