rpyANTs 0.0.5
- Added backward compatibility support for 
Py39 
- Fixed the missing 
pow function from
numpy 
- Added 
atropos segments for templates 
- New normalization: added 
atropos segments for
normalization to templates 
ANTsPyNet model locations are stored in package data
directory to comply with CRAN policy 
- Always run 
abp during normalization 
- Added brain extraction function using base 
ANTs 
- Fixed issue when subject code contains underscore, causing
non-comply 
BIDS format, causing parsing errors 
- Added 
fsaverage template for normalization 
rpyANTs 0.0.4
- Added 
get_xform and set_xform to get and
set qform in ANTsImage 
- Removed dependence 
nibabel, which might conflict with
ANTsPy on certain platforms 
- Using the full path to 
ANTsImage class instead of the
shortcut one from Python to avoid issues where
ANTsImage is not exported
(ANTsPyx==0.5.3) 
- Using multiple imaging files and faster normalization parameters
when normalizing the native images to template
 
- Fixed 
get_lib_fn not available under
ANTsPyx>=0.5.3 
- Changed default 
Python version 
- Fixed bugs when mapping native 
ROI to template 
- Supported 
YAEL processing pipeline and use
ANTsImage as inputs 
- Added mapping images from native to template
 
- Fixed a typo in folder naming
 
- Method 
get_native_mapping gets correct absolute
paths 
- Allowed 
YAEL class to add default images through
constructor 
- Added intensity correction
 
- Exported 
ensure_template and added extra
information 
- Set time-out to ensure downloading the correct templates
 
- Added 
YAEL class to support pipelines mentioned in the
paper for image registration and normalization 
rpyANTs 0.0.3
- Added registration code that reproduces 
Halpern lab
results 
- Added 
t1_preprocess to align MRI to
template using non-linear registration 
- No more injection to 
Python on Windows as
the memory pointer crash has been fixed by upstream developers 
- No active binding to 
antspynet as this
Python package might fail to load on some systems 
rpyANTs 0.0.2
- Added 
antspynet to the installation 
- Added 
ants_apply_transforms and
ants_apply_transforms_to_points to apply registration
transforms 
- Added 
ants_resample_image to resample images 
- Added 
antspynet_brain_extraction to extract brain and
strip skulls 
- Added 
antspynet_deep_atropos and
antspynet_desikan_killiany_tourville_labeling to segment
brain images 
rpyANTs 0.0.1
- Added a 
NEWS.md file to track changes to the
package.