CRAN Package Check Results for Package seqHMM

Last updated on 2025-05-12 01:49:23 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2.6 292.65 273.47 566.12 NOTE
r-devel-linux-x86_64-debian-gcc 1.2.6 200.61 182.70 383.31 NOTE
r-devel-linux-x86_64-fedora-clang 1.2.6 1060.12 OK
r-devel-linux-x86_64-fedora-gcc 1.2.6 1042.33 OK
r-devel-windows-x86_64 1.2.6 323.00 0.00 323.00 FAIL
r-patched-linux-x86_64 1.2.6 289.22 242.11 531.33 NOTE
r-release-linux-x86_64 1.2.6 282.23 241.62 523.85 NOTE
r-release-macos-arm64 1.2.6 230.00 OK
r-release-macos-x86_64 1.2.6 337.00 OK
r-release-windows-x86_64 1.2.6 324.00 330.00 654.00 NOTE
r-oldrel-macos-arm64 1.2.6 232.00 NOTE
r-oldrel-macos-x86_64 1.2.6 386.00 NOTE
r-oldrel-windows-x86_64 1.2.6 378.00 382.00 760.00 NOTE

Check Details

Version: 1.2.6
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: fit_model.Rd: nloptr hidden_paths.Rd: seqIplot mssplot.Rd: seqplot, plot.stslist plot.hmm.Rd: igraph.plotting, seqplot, plot.igraph plot.mhmm.Rd: igraph.plotting, seqplot, plot.igraph seqHMM-deprecated.Rd: nloptr ssp.Rd: seqplot, plot.stslist ssplot.Rd: seqplot, plot.stslist Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Version: 1.2.6
Check: re-building of vignette outputs
Result: FAIL Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: > ### Name: trim_model > ### Title: Trim Small Probabilities of Hidden Markov Model > ### Aliases: trim_model > > ### ** Examples > > data("hmm_biofam") > > # Testing if changing parameter values smaller than 1e-03 to zero > # leads to improved log-likelihood. > hmm_trim <- trim_model(hmm_biofam, zerotol = 1e-03, maxit = 10) [1] "Nothing to trim." > > > > ### * <FOOTER> > ### > cleanEx() > options(digits = 7L) > base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n") Time elapsed: 11.49 0.67 12.16 NA NA > grDevices::dev.off() null device 1 > ### > ### Local variables: *** > ### mode: outline-minor *** > ### outline-regexp: "\\(> \\)?### [*]+" *** > ### End: *** > quit('no') ======== End of example output (where/before crash/hang up occured ?) ======== Flavor: r-devel-windows-x86_64

Version: 1.2.6
Check: installed package size
Result: NOTE installed size is 17.5Mb sub-directories of 1Mb or more: doc 6.4Mb libs 10.2Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64