CRAN Package Check Results for Package ridigbio

Last updated on 2025-06-27 01:49:41 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.1 2.42 175.47 177.89 OK
r-devel-linux-x86_64-debian-gcc 0.4.1 2.07 114.65 116.72 OK
r-devel-linux-x86_64-fedora-clang 0.4.1 264.39 OK
r-devel-linux-x86_64-fedora-gcc 0.4.1 275.89 OK
r-devel-windows-x86_64 0.4.1 4.00 315.00 319.00 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 0.4.1 2.75 170.03 172.78 OK
r-release-macos-arm64 0.4.1 260.00 OK
r-release-macos-x86_64 0.4.1 461.00 OK
r-release-windows-x86_64 0.4.1 5.00 318.00 323.00 OK
r-oldrel-macos-arm64 0.4.1 106.00 OK
r-oldrel-macos-x86_64 0.4.1 219.00 OK
r-oldrel-windows-x86_64 0.4.1 6.00 261.00 267.00 ERROR

Check Details

Version: 0.4.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'BadCoordinateID.Rmd' using rmarkdown --- finished re-building 'BadCoordinateID.Rmd' --- re-building 'BasicUsage.Rmd' using rmarkdown --- finished re-building 'BasicUsage.Rmd' --- re-building 'Fields.Rmd' using rmarkdown --- finished re-building 'Fields.Rmd' --- re-building 'FindTissue.Rmd' using rmarkdown --- finished re-building 'FindTissue.Rmd' --- re-building 'IDDataFlags.Rmd' using rmarkdown Quitting from IDDataFlags.Rmd:57-90 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `as.environment()`: ! using 'as.environment(NULL)' is defunct --- Backtrace: ▆ 1. ├─... %>% ... 2. ├─dplyr::select(...) 3. ├─dplyr::rename(...) 4. └─ridigbio::idig_search_records(...) 5. └─ridigbio::idig_search(...) 6. ├─plyr::rbind.fill(dat, fmt_search_txt_to_df(search_results, fields)) 7. └─ridigbio:::fmt_search_txt_to_df(search_results, fields) 8. └─base::exists("items", httr::content(txt)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'IDDataFlags.Rmd' failed with diagnostics: using 'as.environment(NULL)' is defunct --- failed re-building 'IDDataFlags.Rmd' --- re-building 'MediaAPIDemo.Rmd' using rmarkdown --- finished re-building 'MediaAPIDemo.Rmd' --- re-building 'ModifiedDataID.Rmd' using rmarkdown --- finished re-building 'ModifiedDataID.Rmd' --- re-building 'RecordAPIDemo.Rmd' using rmarkdown --- finished re-building 'RecordAPIDemo.Rmd' --- re-building 'ridigbio.Rmd' using rmarkdown --- finished re-building 'ridigbio.Rmd' SUMMARY: processing the following file failed: 'IDDataFlags.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-windows-x86_64