Last updated on 2025-07-18 01:49:19 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.82 | 256.19 | 269.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.74 | 254.08 | 264.82 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.61 | 277.85 | 291.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 177.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 182.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 164.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/114s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.501, system: 0.038, elapsed: 2.496 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.974, system: 0.067, elapsed: 15.762 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.699, system: 0.188, elapsed: 5.718 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.273 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.096, system: 0.333, elapsed: 25.477 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.472, system: 0.032, elapsed: 2.426 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.908, system: 0.062, elapsed: 13.395 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.290 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.808, system: 0.171, elapsed: 5.755 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.221 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.095, system: 0.301, elapsed: 22.956 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.484, system: 0.032, elapsed: 1.895 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.703, system: 0.054, elapsed: 12.513 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.010, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.709, system: 0.180, elapsed: 4.994 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.234 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.138, system: 0.231, elapsed: 1.074 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.039, system: 0.532, elapsed: 21.911 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.464, system: 0.028, elapsed: 2.221 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.868, system: 0.093, elapsed: 12.876 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.014, elapsed: 0.349 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.770, system: 0.219, elapsed: 6.261 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.262 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.111, system: 0.538, elapsed: 13.917 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.243, system: 0.932, elapsed: 36.941 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/112s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.038, elapsed: 2.157 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.977, system: 0.068, elapsed: 13.334 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.014, elapsed: 0.260 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.599, system: 0.179, elapsed: 6.680 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.360 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.024, system: 0.319, elapsed: 23.556 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.033, elapsed: 2.776 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.951, system: 0.062, elapsed: 14.541 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.316 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.739, system: 0.185, elapsed: 6.538 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.221 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.108, system: 0.320, elapsed: 25.287 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.475, system: 0.031, elapsed: 1.824 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.882, system: 0.049, elapsed: 12.403 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.011, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.583, system: 0.168, elapsed: 5.468 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.246 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.071, system: 0.226, elapsed: 1.023 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.016, system: 0.527, elapsed: 22.218 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.492, system: 0.032, elapsed: 2.245 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.892, system: 0.058, elapsed: 12.081 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.239 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.448, system: 0.168, elapsed: 3.989 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.009, elapsed: 0.250 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.030, system: 0.555, elapsed: 14.191 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.858, system: 0.867, elapsed: 33.889 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64