Last updated on 2025-08-29 01:51:37 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.91 | 253.31 | 266.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.74 | 273.18 | 283.92 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 476.97 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 190.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.57 | 261.65 | 275.22 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.85 | 267.10 | 280.95 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 214.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 201.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 216.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 22.00 | 234.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/116s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.505, system: 0.045, elapsed: 2.005 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.104, system: 0.098, elapsed: 11.763 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.796, system: 0.202, elapsed: 6.063 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.224 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.287, system: 0.385, elapsed: 21.033 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.486, system: 0.039, elapsed: 3.684 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.132, system: 0.057, elapsed: 14.786 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.296 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.743, system: 0.151, elapsed: 6.307 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.229 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.250, system: 0.282, elapsed: 26.258 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.551, system: 0.033, elapsed: 2.417 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.102, system: 0.074, elapsed: 12.723 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.783, system: 0.183, elapsed: 5.534 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.229 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.184, system: 0.206, elapsed: 1.030 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.589, system: 0.533, elapsed: 23.215 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.560, system: 0.042, elapsed: 2.055 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.109, system: 0.115, elapsed: 12.491 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.014, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.860, system: 0.196, elapsed: 5.449 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.207 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.496, system: 0.492, elapsed: 15.610 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.029, system: 0.902, elapsed: 37.000 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/130s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.045, elapsed: 2.739 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.156, system: 0.073, elapsed: 15.290 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.548, system: 0.177, elapsed: 5.562 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.230 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.176, system: 0.334, elapsed: 25.006 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.466, system: 0.026, elapsed: 2.316 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.067, system: 0.087, elapsed: 14.638 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.011, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.665, system: 0.169, elapsed: 6.386 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.010, elapsed: 0.372 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.108, system: 0.330, elapsed: 24.967 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.626, system: 0.053, elapsed: 3.395 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.317, system: 0.203, elapsed: 17.826 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.012, elapsed: 0.394 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.587, system: 0.210, elapsed: 5.995 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.015, elapsed: 0.307 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.044, system: 0.226, elapsed: 0.997 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.579, system: 0.758, elapsed: 30.189 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.444, system: 0.026, elapsed: 2.050 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.027, system: 0.073, elapsed: 14.474 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.748, system: 0.180, elapsed: 6.295 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.007, elapsed: 0.322 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.194, system: 0.469, elapsed: 17.607 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.426, system: 0.795, elapsed: 42.159 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64