Last updated on 2025-05-09 01:50:37 CEST.
| Package | NOTE | OK |
|---|---|---|
| BGGE | 3 | 10 |
| snpReady | 13 |
Current CRAN status: NOTE: 3, OK: 10
Version: 0.6.5
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: NOTE: 13
Version: 0.9.6
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Italo Granato <italo.granato@gmail.com>’
File 'R/snpReady-internal.R' sets .Random.seed.
This is usually neither needed nor wanted.
Found the following \keyword or \concept entries
which likely give several index terms:
File ‘maize.hyb.Rd’:
\keyword{datasets;}
File ‘maize.line.Rd’:
\keyword{datasets;}
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.9.6
Check: Rd files
Result: NOTE
checkRd: (-1) maize.line.Rd:9: Lost braces in \itemize; meant \describe ?
checkRd: (-1) maize.line.Rd:10: Lost braces in \itemize; meant \describe ?
checkRd: (-1) maize.line.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) maize.line.Rd:12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) raw.data.Rd:26: Lost braces; missing escapes or markup?
26 | \item{call.rate}{\code{numeric}. Threshold for removing marker by missing genotype rate. SNP with \code{call rate} below threshold are removed from dataset. Must be between {0, 1}}
| ^
checkRd: (-1) raw.data.Rd:28: Lost braces; missing escapes or markup?
28 | \item{maf}{Threshold for removing SNP by minor allele frequency. Must be between {0, 1}}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64