29b59182ab85d3ec57b902096819bd7b *ChangeLog
340de28ea643c1a5e9d4214642141d2b *DESCRIPTION
914b93ac77c2eb554a24ea4e09d53304 *NAMESPACE
fe756da73cbe5c788192b3ecfa24e84a *R/NetRep.R
7eed5212465a6865a93a062ddc2d2cf8 *R/RcppExports.R
d50cf1ac54dfbeb8e61aec17f92d3b70 *R/bigMatrix.R
2077e73665f1cc1bca5234ab16734347 *R/check-user-input.R
e8ccbc57f669d14835ce88287a7452e0 *R/contingency.R
63cb69feeb08fdad3c3f315e06bc8364 *R/disk-matrix-class.R
08f793a5c16931879e011050243ebf03 *R/modulePreservation.R
410f7244ec1183d2aaf0d919ebeac1c6 *R/multi-machine.R
8a443802ebd08f96b8547904733b17b3 *R/networkProperties.R
1da0085088f01c8a8da94bcb1c87baae *R/orderNodes.R
380a6a6cf126f04a3a6f10c555e710c9 *R/orderSamples.R
4e55cca4f1f22461e8414d9ae69a9623 *R/plot-functions.R
f404248600047435406a71121df13d9f *R/plot-module.R
cc8c052296eacb3412b5e1fb65ac9baf *R/plot-topology.R
8b10f33ea8064b82c7a21cb4d5d98911 *R/plot-utils.R
4ac97972d2f4256548ac693286ed8610 *R/pperm.R
dac9e427807c1024dc799b571b986c29 *R/roxygen-defs.R
8160e52c53531fe29eb2f5bdfc8a6040 *R/utils.R
67415e6300a64e388beb13c17c6afc3b *build/vignette.rds
8a3c7054b51a4ab390a3ca46304bfaa1 *data/NetRep.rda
c536bd1266cb482784e444933a92c77e *inst/CITATION
081f3fd86c6b41b7c65d437c3bb37768 *inst/doc/NetRep.R
a99df83d7de17a3203796315f0d6f945 *inst/doc/NetRep.Rmd
5dc4ed4024aff5fc92b66f39d99a60d1 *inst/doc/NetRep.html
3b6103161c800d58de9d5941f38e081c *man/NetRep.Rd
f899ba1ed4416ef81fd7d0843410d0fe *man/bigMatrix.Rd
31a925dee8a00c16d2d7c5c7b575be47 *man/combineAnalyses.Rd
59fcee8f5a29028c78c97d117e33a493 *man/common_params.Rd
be0f70e7adfe48277e26e044b09daf52 *man/disk.matrix.Rd
4cbb2fdb24dffa82e686af8e89e8fe75 *man/example-data.Rd
6071333b095ec9d8d55b06d8b1f8d9ac *man/modulePreservation.Rd
3b3154b9799d1e24b07d11d60d3bafa7 *man/networkProperties.Rd
6c1a01dfc92797eec0aa86e4d13a87ca *man/nodeOrder.Rd
1cf3a45d8b5fad286d61d75e5d6b987b *man/orderModules_param.Rd
e5c4d7614bc1f9428060c444ba958529 *man/permutationTest.Rd
0512418f9b50908fd7d7b15c80fb0d5e *man/plotModule.Rd
127fda8c5f19ab0f97e9802748de4908 *man/plotTopology.Rd
56382cb48b47166abf69a62f0d249799 *man/plot_params.Rd
19f96eb92448ef8ce5dc67169cf433ec *man/requiredPerms.Rd
3f86bbc19fefa37709105d3f08112c44 *man/sampleOrder.Rd
f1e5da5966b5dd090f26c7577987f4d6 *man/simplify_param.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars.win
e1b12d9031688326ee642c9abdd62b70 *src/NetRep_types.h
e5484e4e1a0f83bfb44fc9ef5549e40b *src/RcppExports.cpp
5d7169f5607c93456b2ca596e705b212 *src/checkFinite.cpp
576cf9c3c2022925d56b01cb2ba8f3ca *src/discProps.cpp
fea2deb022e6771e9096c8da7770bf3a *src/interrupt.cpp
b275203aad5cbe5b79337814ea751e28 *src/interrupt.h
5a3f6034b5f3ec518819a732b5f6b73f *src/netStats.cpp
e7b13aedcf8bef5165edc3b122e983a6 *src/netStats.h
187afcfc081fc0a2d9c4133cd5f8d8e3 *src/permutations.cpp
62ad1c54c56ee542cf2b96ba6473ac46 *src/permutationsNoData.cpp
3bc483d4f973c9db30b6dc4be162f2f5 *src/properties.cpp
ee90ebaebd6e9a9ac685673ca128384f *src/scale.cpp
e922976e1a33342fa96e3440c7ba0123 *src/scale.h
51b002a0f6b563915535b82516589a4c *src/thread-utils.cpp
9fa9e24cd399bc1dc985f77be42c8471 *src/thread-utils.h
e232fac9d7ae77f20a0ea7bb43c00596 *src/utils.cpp
7e1fdfb00a69d0e3f4fa02cccb702ca5 *src/utils.h
f6b3cf86c7bb8bb6b1d852e5d1bbbad6 *tests/testthat.R
3fdc40d64c491de9516641448eb5070c *tests/testthat/test1-main.R
b5cc0f94e90139c06fa0ea8c4859f734 *tests/testthat/test2-downstream-analysis.R
a99df83d7de17a3203796315f0d6f945 *vignettes/NetRep.Rmd
96c1d2d7e5cf603795e7f1f63e8e662b *vignettes/NetRep_files/figure-html/correlation_heatmap-1.jpeg
f9124ed26c2baae8afbe4dea68ffb028 *vignettes/NetRep_files/figure-html/disk_matrix_dry_run-1.jpeg
2f491ea81653615d8df9dff8ea3252b6 *vignettes/NetRep_files/figure-html/disk_matrix_plot-1.jpeg
0e92b4ac934a9ec1600a38624bdd8642 *vignettes/NetRep_files/figure-html/dry_run-1.jpeg
fd0be4e14397f4b119c175bef4f7746b *vignettes/NetRep_files/figure-html/dry_run_customised-1.jpeg
a8fe9746d7ebf0cd42bd5b373737f19e *vignettes/NetRep_files/figure-html/mean_degree-1.jpeg
f8d40886fd09db9e59d7bd4acd06a8ff *vignettes/NetRep_files/figure-html/mean_degree_customised-1.jpeg
88103eedb32fbf586bd3449e35cce469 *vignettes/NetRep_files/figure-html/modules_in_discovery-1.jpeg
2a0ce3df957f068211c3d0749d998a4a *vignettes/NetRep_files/figure-html/modules_in_test-1.jpeg
5ea9ec34f5f0521da8cd2de575efdc06 *vignettes/NetRep_files/img/mod1.jpg
82e535c5fe55fbdc729f291df64dec26 *vignettes/NetRep_files/img/preservation.jpg
