Last updated on 2024-09-27 01:50:35 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| basicdrm | 13 | ||
| braidReports | 1 | 3 | 9 |
| braidrm | 13 | ||
| rtms | 13 |
Current CRAN status: OK: 13
Current CRAN status: ERROR: 1, NOTE: 3, OK: 9
Version: 0.5.4
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
braidReports-package.Rd: braidrm-package
es8analysis.Rd: es8olatmz, runBRAIDanalysis
makeBRAIDreport.Rd: runBRAIDanalysis, scale_fill_gradientn,
geom_point, geom_line
potentiationPlot.Rd: geom_ribbon, geom_point, geom_line, geom_hline
voronoi.Rd: geom_polygon
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 0.5.4
Check: R code for possible problems
Result: NOTE
calculateIAE: no visible global function definition for ‘evalBRAIDrsm’
makeBRAIDreport: no visible global function definition for
‘evalBRAIDrsm’
makeBRAIDreport: no visible global function definition for
‘calcBRAIDconfint’
makeBRAIDreport : <anonymous>: no visible global function definition
for ‘invertBRAIDrsm’
potentiationPlot: no visible global function definition for
‘calcBRAIDconfint’
potentiationPlot : <anonymous>: no visible global function definition
for ‘evalBRAIDrsm’
potentiationPlot: no visible global function definition for
‘evalBRAIDrsm’
Undefined global functions or variables:
calcBRAIDconfint evalBRAIDrsm invertBRAIDrsm
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.5.4
Check: Rd cross-references
Result: WARN
Missing link or links in Rd file 'braidReports-package.Rd':
‘braidrm-package’
Missing link or links in Rd file 'es8analysis.Rd':
‘es8olatmz’ ‘runBRAIDanalysis’
Missing link or links in Rd file 'makeBRAIDreport.Rd':
‘runBRAIDanalysis’
See section 'Cross-references' in the 'Writing R Extensions' manual.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.5.4
Check: examples
Result: ERROR
Running examples in ‘braidReports-Ex.R’ failed
The error most likely occurred in:
> ### Name: calculateIAE
> ### Title: Calculate the Index of Achievable Efficacy
> ### Aliases: calculateIAE
> ### Keywords: misc
>
> ### ** Examples
>
> data(es8analysis)
> bfit <- es8analysis$braidFit
> # Modelled effect is base-10 logarithm of cell survival relative to negative controls,
> # so a level of -2 reflects 99% cell killing
> calculateIAE(bfit$fullpar,c(-1,-2),c(1.015*10^-6,5*10^-5))
Error in evalBRAIDrsm(sc1, sc2, parv) :
could not find function "evalBRAIDrsm"
Calls: calculateIAE
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Current CRAN status: OK: 13
Current CRAN status: OK: 13