Last updated on 2025-10-13 01:48:39 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.21 | 256.80 | 270.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.79 | 242.09 | 251.88 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.76 | 265.07 | 279.83 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 167.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 171.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/117s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.058, elapsed: 2.226 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.984, system: 0.109, elapsed: 11.392 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.012, elapsed: 0.200 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.722, system: 0.215, elapsed: 4.677 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.007, elapsed: 0.220 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.142, system: 0.426, elapsed: 19.432 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.529, system: 0.050, elapsed: 1.769 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.076, system: 0.159, elapsed: 15.720 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.014, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.773, system: 0.211, elapsed: 4.929 seconds]
Computing values for grid cells...
... done. [user: 0.153, system: 0.003, elapsed: 0.164 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.250, system: 0.460, elapsed: 23.474 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.516, system: 0.043, elapsed: 1.887 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.204, system: 0.220, elapsed: 12.535 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.012, elapsed: 0.208 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.733, system: 0.227, elapsed: 4.643 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.005, elapsed: 0.179 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.167, system: 0.226, elapsed: 1.053 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.554, system: 0.756, elapsed: 21.240 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.579, system: 0.054, elapsed: 2.534 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.144, system: 0.146, elapsed: 20.966 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.325 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.873, system: 0.228, elapsed: 6.508 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.215 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.521, system: 0.688, elapsed: 14.827 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.119, system: 1.163, elapsed: 46.436 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/112s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.488, system: 0.044, elapsed: 2.067 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.873, system: 0.106, elapsed: 11.108 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.014, elapsed: 0.226 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.608, system: 0.232, elapsed: 5.100 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.181 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.837, system: 0.425, elapsed: 19.342 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.510, system: 0.042, elapsed: 1.727 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.844, system: 0.180, elapsed: 10.342 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.018, elapsed: 0.255 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.707, system: 0.234, elapsed: 4.634 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.009, elapsed: 0.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.966, system: 0.528, elapsed: 17.909 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.726, system: 0.083, elapsed: 2.376 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.995, system: 0.246, elapsed: 11.690 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.230 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.550, system: 0.208, elapsed: 6.697 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.009, elapsed: 0.420 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.074, system: 0.246, elapsed: 1.632 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.318, system: 0.847, elapsed: 24.072 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.560, system: 0.054, elapsed: 3.101 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.959, system: 0.164, elapsed: 12.788 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.224 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.704, system: 0.260, elapsed: 5.817 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.013, elapsed: 0.285 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.226, system: 0.678, elapsed: 20.544 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.428, system: 1.216, elapsed: 43.837 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64