CRAN Package Check Results for Maintainer ‘Karl Broman <broman at wisc.edu>’

Last updated on 2024-06-14 01:52:04 CEST.

Package ERROR NOTE OK
aRxiv 1 12
broman 1 12
chromer 1 12
lineup 1 12
lineup2 1 12
mbmixture 1 12
mmconvert 1 12
negenes 1 12
qtl 1 8 4
qtl2 1 8 4
qtl2convert 1 12
qtl2fst 1 12
qtlbook 13
qtlcharts 1 12
regress 13
simcross 1 12
xoi 1 12

Package aRxiv

Current CRAN status: ERROR: 1, OK: 12

Version: 0.10
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'devtools', 'roxygen2', 'testthat' Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.10
Check: tests
Result: ERROR Running ‘testthat.R’ [0s/1s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) Error in library(testthat) : there is no package called 'testthat' Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package broman

Current CRAN status: ERROR: 1, OK: 12

Version: 0.84
Check: package dependencies
Result: ERROR Package required but not available: ‘ggplot2’ Packages suggested but not available for checking: 'testthat', 'devtools', 'roxygen2' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Package chromer

Current CRAN status: ERROR: 1, OK: 12

Version: 0.8
Check: package dependencies
Result: ERROR Packages required but not available: 'dplyr', 'tibble' Packages suggested but not available for checking: 'roxygen2', 'testthat' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Package lineup

Current CRAN status: ERROR: 1, OK: 12

Version: 0.42
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'roxygen2', 'devtools', 'testthat' Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.42
Check: tests
Result: ERROR Running ‘testthat.R’ [0s/0s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) Error in library(testthat) : there is no package called 'testthat' Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package lineup2

Current CRAN status: ERROR: 1, OK: 12

Version: 0.6
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'testthat', 'devtools', 'roxygen2' Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.6
Check: tests
Result: ERROR Running ‘testthat.R’ [0s/1s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) Error in library(testthat) : there is no package called 'testthat' Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package mbmixture

Current CRAN status: ERROR: 1, OK: 12

Version: 0.4
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'testthat', 'devtools', 'roxygen2' Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.4
Check: tests
Result: ERROR Running ‘testthat.R’ [0s/0s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) Error in library(testthat) : there is no package called 'testthat' Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package mmconvert

Current CRAN status: ERROR: 1, OK: 12

Version: 0.10
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'testthat', 'devtools', 'roxygen2', 'qtl2' Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.10
Check: tests
Result: ERROR Running ‘testthat.R’ [0s/1s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) Error in library(testthat) : there is no package called 'testthat' Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package negenes

Current CRAN status: NOTE: 1, OK: 12

Version: 1.0-12
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘roxygen2’ Flavor: r-devel-linux-x86_64-debian-gcc

Package qtl

Current CRAN status: ERROR: 1, NOTE: 8, OK: 4

Additional issues

noRemap

Version: 1.66
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘testthat’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.66
Check: tests
Result: ERROR Running ‘test_io.R’ [1s/1s] Comparing ‘test_io.Rout’ to ‘test_io.Rout.save’ ... OK Running ‘test_mapqtl_io.R’ [3s/4s] Comparing ‘test_mapqtl_io.Rout’ to ‘test_mapqtl_io.Rout.save’ ... OK Running ‘test_qtl.R’ [4s/6s] Running ‘test_scanonevar.R’ [8s/9s] Comparing ‘test_scanonevar.Rout’ to ‘test_scanonevar.Rout.save’ ... OK Running ‘test_tidyIO.R’ [0s/1s] Comparing ‘test_tidyIO.Rout’ to ‘test_tidyIO.Rout.save’ ... OK Running ‘testaugmentation.R’ [2s/3s] Running ‘testthat.R’ [0s/1s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) Error in library(testthat) : there is no package called 'testthat' Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.66
Check: installed package size
Result: NOTE installed size is 10.6Mb sub-directories of 1Mb or more: R 1.7Mb contrib 3.8Mb doc 3.0Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package qtl2

Current CRAN status: ERROR: 1, NOTE: 8, OK: 4

Version: 0.36
Check: package dependencies
Result: ERROR Package required but not available: ‘RSQLite’ Packages suggested but not available for checking: 'testthat', 'devtools', 'roxygen2', 'vdiffr' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.36
Check: installed package size
Result: NOTE installed size is 6.4Mb sub-directories of 1Mb or more: extdata 3.3Mb libs 1.7Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package qtl2convert

Current CRAN status: ERROR: 1, OK: 12

Version: 0.30
Check: package dependencies
Result: ERROR Package required but not available: ‘qtl2’ Packages suggested but not available for checking: 'testthat', 'devtools', 'roxygen2' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Package qtl2fst

Current CRAN status: ERROR: 1, OK: 12

Version: 0.26
Check: package dependencies
Result: ERROR Package required but not available: ‘qtl2’ Package suggested but not available for checking: ‘testthat’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Package qtlbook

Current CRAN status: OK: 13

Package qtlcharts

Current CRAN status: ERROR: 1, OK: 12

Version: 0.16
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'devtools', 'roxygen2', 'testthat' Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.16
Check: tests
Result: ERROR Running ‘Rmdtest.R’ [0s/0s] Running ‘htmltest.R’ [0s/1s] Running ‘testthat.R’ [0s/1s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) Error in library(testthat) : there is no package called 'testthat' Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package regress

Current CRAN status: OK: 13

Package simcross

Current CRAN status: ERROR: 1, OK: 12

Version: 0.6
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'testthat', 'devtools', 'roxygen2' Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.6
Check: tests
Result: ERROR Running ‘testthat.R’ [0s/1s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) Error in library(testthat) : there is no package called 'testthat' Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package xoi

Current CRAN status: ERROR: 1, OK: 12

Version: 0.72
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'devtools', 'roxygen2', 'testthat' Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.72
Check: tests
Result: ERROR Running ‘testthat.R’ [0s/1s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) Error in library(testthat) : there is no package called 'testthat' Execution halted Flavor: r-devel-linux-x86_64-debian-gcc