Last updated on 2024-06-14 01:52:03 CEST.
| Package | ERROR | WARN | NOTE | OK |
|---|---|---|---|---|
| bbmle | 1 | 1 | 11 | |
| broom.mixed | 1 | 12 | ||
| emdbook | 10 | 3 | ||
| gtools | 1 | 12 | ||
| margins | 6 | |||
| prediction | 2 | 8 | ||
| R2admb | 1 | 9 | 3 | |
| reformulas | 1 | 12 |
Current CRAN status: ERROR: 1, WARN: 1, OK: 11
Version: 1.0.25.1
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'rms', 'ggplot2', 'AICcmodavg', 'Hmisc', 'optimx', 'testthat'
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.25.1
Check: tests
Result: ERROR
Running ‘BIC.R’ [2s/3s]
Comparing ‘BIC.Rout’ to ‘BIC.Rout.save’ ... OK
Running ‘ICtab.R’ [2s/3s]
Comparing ‘ICtab.Rout’ to ‘ICtab.Rout.save’ ... OK
Running ‘RUnit-tests.R’ [0s/1s]
Running ‘binomtest1.R’ [3s/5s]
Comparing ‘binomtest1.Rout’ to ‘binomtest1.Rout.save’ ... OK
Running ‘boundstest.R’ [0s/1s]
Running ‘controleval.R’ [2s/3s]
Comparing ‘controleval.Rout’ to ‘controleval.Rout.save’ ... OK
Running ‘eval.R’ [2s/3s]
Comparing ‘eval.Rout’ to ‘eval.Rout.save’ ... OK
Running ‘formulatest.R’ [4s/5s]
Comparing ‘formulatest.Rout’ to ‘formulatest.Rout.save’ ... OK
Running ‘glmcomp.R’ [2s/3s]
Running ‘gradient_vecpar_profile.R’ [13s/18s]
Comparing ‘gradient_vecpar_profile.Rout’ to ‘gradient_vecpar_profile.Rout.save’ ... OK
Running ‘grtest1.R’ [3s/4s]
Comparing ‘grtest1.Rout’ to ‘grtest1.Rout.save’ ... OK
Running ‘impsamp.R’ [2s/4s]
Running ‘methods.R’ [2s/3s]
Comparing ‘methods.Rout’ to ‘methods.Rout.save’ ... OK
Running ‘mortanal.R’ [3s/4s]
Comparing ‘mortanal.Rout’ to ‘mortanal.Rout.save’ ... OK
Running ‘optimize.R’ [3s/4s]
Comparing ‘optimize.Rout’ to ‘optimize.Rout.save’ ... OK
Running ‘optimizers.R’ [2s/4s]
Comparing ‘optimizers.Rout’ to ‘optimizers.Rout.save’ ... OK
Running ‘optimx.R’ [2s/3s]
Comparing ‘optimx.Rout’ to ‘optimx.Rout.save’ ...25,27d24
< Warning message:
< In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
< there is no package called 'optimx'
Running ‘order.R’ [2s/4s]
Comparing ‘order.Rout’ to ‘order.Rout.save’ ... OK
Running ‘parscale.R’ [3s/4s]
Comparing ‘parscale.Rout’ to ‘parscale.Rout.save’ ... OK
Running ‘predict.R’ [2s/3s]
Comparing ‘predict.Rout’ to ‘predict.Rout.save’ ... OK
Running ‘prof_newmin.R’ [2s/4s]
Running ‘prof_spec.R’ [3s/5s]
Running ‘profbound.R’ [3s/5s]
Comparing ‘profbound.Rout’ to ‘profbound.Rout.save’ ... OK
Running ‘richards.R’ [12s/16s]
Comparing ‘richards.Rout’ to ‘richards.Rout.save’ ... OK
Running ‘startvals.R’ [2s/4s]
Comparing ‘startvals.Rout’ to ‘startvals.Rout.save’ ... OK
Running ‘startvals2.R’ [3s/4s]
Comparing ‘startvals2.Rout’ to ‘startvals2.Rout.save’ ... OK
Running ‘test-relist1.R’ [2s/4s]
Comparing ‘test-relist1.Rout’ to ‘test-relist1.Rout.save’ ... OK
Running ‘testbounds.R’ [2s/3s]
Comparing ‘testbounds.Rout’ to ‘testbounds.Rout.save’ ... OK
Running ‘testderiv.R’ [2s/4s]
Comparing ‘testderiv.Rout’ to ‘testderiv.Rout.save’ ... OK
Running ‘testenv.R’ [3s/4s]
Comparing ‘testenv.Rout’ to ‘testenv.Rout.save’ ... OK
Running ‘testparpred.R’ [3s/4s]
Comparing ‘testparpred.Rout’ to ‘testparpred.Rout.save’ ... OK
Running ‘tmptest.R’ [2s/4s]
Comparing ‘tmptest.Rout’ to ‘tmptest.Rout.save’ ... OK
Running ‘update.R’ [2s/3s]
Comparing ‘update.Rout’ to ‘update.Rout.save’ ... OK
Running the tests in ‘tests/glmcomp.R’ failed.
Complete output:
> library(bbmle)
Loading required package: stats4
> library(testthat)
Error in library(testthat) : there is no package called 'testthat'
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.25.1
Check: re-building of vignette outputs
Result: NOTE
Note: skipping ‘mle2.Rnw’ due to unavailable dependencies: 'Hmisc'
Note: skipping ‘quasi.Rnw’ due to unavailable dependencies: 'AICcmodavg'
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.25.1
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘mle2.Rnw’ using knitr
Error: processing vignette 'mle2.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'mle2.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.152 \hlkwd{library}\hldef
{(emdbook)}
?
! Emergency stop.
! Emergency stop.
l.152
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘mle2.Rnw’
--- re-building ‘quasi.Rnw’ using knitr
Error: processing vignette 'quasi.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'quasi.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.111 \hldef
{dfun} \hlkwb{<-} \hlkwa{function}\hldef{(}\hlkwc{object}\hldef{...
?
! Emergency stop.
l.111
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘quasi.Rnw’
SUMMARY: processing the following files failed:
‘mle2.Rnw’ ‘quasi.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64
Current CRAN status: ERROR: 1, NOTE: 12
Version: 0.2.9.5
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘glmmADMB’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.2.9.5
Check: package dependencies
Result: ERROR
Packages required but not available:
'broom', 'dplyr', 'forcats', 'purrr', 'stringr', 'tibble', 'tidyr',
'furrr'
Packages suggested but not available for checking:
'brms', 'dotwhisker', 'testthat', 'ggplot2', 'glmmADMB', 'glmmTMB',
'lmerTest', 'lme4', 'mediation', 'pbkrtest', 'posterior', 'rstan',
'rstanarm', 'R2jags'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.9.5
Check: installed package size
Result: NOTE
installed size is 5.5Mb
sub-directories of 1Mb or more:
extdata 5.0Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: NOTE: 10, OK: 3
Version: 1.3.13
Check: Rd files
Result: NOTE
checkRd: (-1) NEWS.Rd:194: Lost braces; missing escapes or markup?
194 | \item added {d,r}betabinom
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 1.3.13
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'R2jags', 'testthat'
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: NOTE: 1, OK: 12
Version: 3.9.5
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'car', 'SGP', 'taxize'
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 6
Current CRAN status: ERROR: 2, OK: 8
Version: 0.3.18
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘testthat’
Packages which this enhances but not available for checking:
'AER', 'caret', 'lme4', 'mlogit', 'sampleSelection'
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.18
Check: tests
Result: ERROR
Running ‘testthat-prediction.R’ [0s/0s]
Running the tests in ‘tests/testthat-prediction.R’ failed.
Complete output:
> library("testthat")
Error in library("testthat") : there is no package called 'testthat'
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.18
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavor: r-devel-windows-x86_64
Current CRAN status: WARN: 1, NOTE: 9, OK: 3
Version: 0.7.16.3
Check: Rd files
Result: NOTE
checkRd: (-1) do_admb.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) do_admb.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) do_admb.Rd:49: Lost braces in \itemize; meant \describe ?
checkRd: (-1) read_pars.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_pars.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_pars.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_pars.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_pars.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_pars.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_pars.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_pars.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_pars.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) read_pars.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 0.7.16.3
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'lme4', 'ggplot2', 'testthat'
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.7.16.3
Check: re-building of vignette outputs
Result: NOTE
Note: skipping ‘R2admb.Rnw’ due to unavailable dependencies: 'ggplot2'
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.7.16.3
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘R2admb.Rnw’ using knitr
Error: processing vignette 'R2admb.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'R2admb.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.121 \hldef
{fitted.model} \hlkwb{<-} \hlkwd{do_admb}\hldef{(fn,data,params,}
?
! Emergency stop.
! Emergency stop.
l.121
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘R2admb.Rnw’
SUMMARY: processing the following file failed:
‘R2admb.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64
Current CRAN status: NOTE: 1, OK: 12
Version: 0.3.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘lme4’
Flavor: r-devel-linux-x86_64-debian-gcc