efbac8d796c2cce5081ea6d1b4de0828 *DESCRIPTION
220766f3030828297db042c0016d3b42 *LICENSE
744e60221c1fb97328ac1e0d1cb903dc *NAMESPACE
d38f26b630a45cd4c42fb2716254d6a7 *NEWS.md
df6cc46bc7fae1a55b713f3d5065b35a *R/DiveR-package.R
48420446fb0dbe9b6dceda85e3eb8814 *R/concat_conserved_kmer.R
e12a34d2db15e00f7d6e91a43289b822 *R/json2csv.R
6dc1a2722e22457a7179349a9b341e1b *R/metadata_extraction.R
fc60ee537a4a7c05b3b89d8597258536 *R/plot_conservation_level.R
111d642412ffc5cd95e96031b0720b1c *R/plot_correlation.R
9eb040eda43750010435416e71235fb8 *R/plot_dynamics_protein.R
fc3e3d522106bdbf2a8ebe48024df7d8 *R/plot_dynamics_proteome.R
3773f4965f417975f3fd4121cc0d709d *R/plot_entropy.R
d425903d9a7a63b7ba9704341ae24c62 *R/plot_time.R
64e6275dfa380097c6930b206c512847 *R/plot_world_map.R
2ea0a976a45614ec5f89c1eb68c88ae3 *R/sample_data.R
f1249feff12050f4e7f11860f1c0e581 *README.md
62b66209c063aa851aedb5ad64fbc7d4 *data/JSON_sample.rda
bd8962ecc600c91148820600ed78bfb5 *data/metadata.rda
7ab66b3fd68653c57318bfa2a6a0aedc *data/protein_2hosts.rda
a85ebef45d53feaa71932f4126c88937 *data/proteins_1host.rda
858919b5e025fa8ea2e2162908331ce1 *inst/extdata/GISAID_EpiCoV.faa
459bbd3a7e16dd489d12be091f4dbeb5 *inst/extdata/NCBI_Protein.faa
da3f9c8ef5c3d5bcdbe6f7dfe48dcf27 *inst/extdata/city_mapper.csv
63ccf83861163d24f8470566a3712838 *man/JSON_sample.Rd
787711a850234d29bbfa2ec74981a901 *man/concat_conserved_kmer.Rd
f6ec5b69a40e2da7ccd68be7d7f3ca48 *man/extract_from_GISAID.Rd
722687d5ce68659c39253f0d1d8cb709 *man/extract_from_NCBI.Rd
bc8f755b926f2543f400dd8bfa502ca4 *man/figures/vdiver_overview_chart.png
e5307aee656c14596f3fc4cbbe31bf37 *man/json2csv.Rd
d4b48c5e27d7675488bb9cdca70acfec *man/match_region_to_target.Rd
5b544e0faaa749520993ac472e470601 *man/metadata.Rd
a0e997094c78b3676448e52999a8200a *man/metadata_extraction.Rd
7bdf952d639ba3090cacf479eeb998d1 *man/plot_conservation_level.Rd
b1bf1a9e7629f5e3c1358a2b25477726 *man/plot_correlation.Rd
0ee81e36a8a3787e923ce302700ad448 *man/plot_dynamics_protein.Rd
9cb05fdb41accd97faa8ca06afb8540f *man/plot_dynamics_proteome.Rd
075f3c4abed3f3543fac8c108ee0e1fb *man/plot_entropy.Rd
7d8507bb446a42c8c715f503163263bb *man/plot_time.Rd
640d09263d1d5b5d003718243a411503 *man/plot_world_map.Rd
23cfe0679ed5c2193ab44e09da0f2845 *man/protein_2hosts.Rd
96bedfa676b80aefe1b4eba9fab9febb *man/proteins_1host.Rd
0f59f3a768a13481df70603f96b6673c *man/vDiveR-package.Rd
17a5572da216dce0138d6704916eb0ea *tests/testthat.R
7536fbf61062b0cf039004e7406a917c *tests/testthat/test-concat-seq.R
323f1e7a703f3b259f842a5ebcea896e *tests/testthat/test-json2csv.R
