4b9f300412548e2de53859195fe8809c *DESCRIPTION
61588a1fedd2db57509db89e82b27227 *NAMESPACE
cd5c173f0f0905c4b0bb4c3c576cc718 *R/RcppExports.R
908294afd10510881bd70ce3faaecd33 *R/dnaManipulate.R
105d15bdfdd6f9dbf1106a3d8d35d973 *R/external.R
2832c1d668e90ed087fec24397064509 *R/fasta.R
f126c1772879900dd2a5861258c4e79b *R/fastq.R
5a3a207a00a94ae467dcd4f5aa9c9df3 *R/gff.R
0fb7f904805ac8c8d7c45d3f7f69cfa4 *R/microseq-package.R
7f084364c4e5881fa7e14997d5b6c044 *R/multialign.R
2451136e8e51ead8bf830456254fe603 *R/orfs.R
e1d9deda67d179f7d0b41536599c4c1c *R/utilityfun.R
af1e142fcd921434271b775104402eba *inst/extdata/16S.fasta
f67702a09be65b9703a89f10309b951e *inst/extdata/small.faa
de6f80cfe8dbbdf1728facd546bc8c5b *inst/extdata/small.fastq.gz
e58d1eee8cf80f5d4b02a0ff22678002 *inst/extdata/small.ffn
0258dbb6ee28611040e0fb9078a36319 *inst/extdata/small.fna
fc701eae38ac1319e1f4939caf74b21b *inst/extdata/small.gff
d8c9ff71f889b580a9c6d4adeb291eb1 *inst/extdata/small.msa
fa3c12881e60d2d33376c2c7d19425e3 *man/backTranslate.Rd
6250de7bdf3578e560986fbe8647f2e0 *man/findGenes.Rd
7eb4de06b644dbfba8d737c861779c64 *man/findOrfs.Rd
97c222cc4e006cd5a92221135a40913e *man/findrRNA.Rd
489b41181d6c2797babca23eef0a4445 *man/gff2fasta.Rd
ac3983e1f58d12705d3a1f7b4413b675 *man/gregexpr.Rd
2279a6cd441d716c99c563a0f3698d1f *man/iupac2regex.Rd
6019304eb430e709428a9f148feaa448 *man/lorfs.Rd
fa434770ec888cfd5d8d06069516ab85 *man/microseq.Rd
fdece0a8336a67edb60c26c860942ec7 *man/msa2mat.Rd
7ee47dfb3f996141b5bc463c97d2e18d *man/msaTrim.Rd
94a803622c3b1b5a6547080e1c03a3d4 *man/msalign.Rd
8ae3cd898303a51b3447ab92e9928e8c *man/muscle.Rd
05876c7d0cae365b26ef46f71274d95a *man/orfLength.Rd
5cddbc2e30292acb0f85ba5887b03c4a *man/orfSignature.Rd
ab7800c0676b531ee206f2424418c102 *man/readFasta.Rd
649959992c749969a4f2ef0f3508e7f6 *man/readFastq.Rd
d51bd612a360505022366d51046d19b0 *man/readGFF.Rd
a82023824bed836ca2445445fbb28bea *man/reverseComplement.Rd
91d85dc47d20ba6811c209fa1b616db8 *man/translate.Rd
9075a342959a68c339744d97fc54dd44 *src/Makevars
453b92a74f147ed25678e3ef7b9d41d9 *src/Makevars.win
5ca63e536e90571549ebc6061a7d6602 *src/ORF_index.cpp
78f3f0886d6a08cf4a57d20d2470acea *src/RcppExports.cpp
ba139b8216b1192b8a5a833529a9e606 *src/extractSeq.cpp
d01287dea6228346281497855b426ae4 *src/init.c
6ece79a89fa2ff8f7d3dc357cbc8c604 *src/revComp.cpp
ffff2563e65622575148c5c93195b575 *src/translate.cpp
