de81553bba6c3ead7d0899cd6f3d5dea *DESCRIPTION
9d73bc09e5b7ef665ba2ee4c5a766f9f *NAMESPACE
8d6a6dcc5fdd1a67ffcb9ee0e38fce73 *NEWS.md
634b64dcd60173183b34d78cff969f9c *R/TMBtrait.R
5a771af830864a47e174b9640bf454cc *R/VP.gllvm.R
8b91bd6418225bbf728fc122204313c4 *R/aicc.gllvm.R
08d12e6c3068e6ebe1e294cc18a92f64 *R/anova.gllvm.R
f18ed7ccec55226d551cfe21e9a6af6b *R/coef.gllvm.R
96ef3b4388f319caf61073eb0b03df72 *R/coefplot.gllvm.R
2c2db3439f2c6ef786ff5580cb2728ce *R/confint.gllvm.R
358eaff8c752b27bd808aacdb4a2f164 *R/ecoCoefs.gllvm.R
054734b3542ee50984896682916f3175 *R/getEnvironCov.gllvm.R
1ac9229b3afb94ad243a2f520c22f163 *R/getLV.gllvm.R
1999708456c749b04e9a2b69aa150961 *R/getLoadings.gllvm.R
18625ab700ed7b04e8b3657b3580dc68 *R/getPredictErr.gllvm.R
f3f6dd6fe0be11a05e84b9b0140abec1 *R/getResidualCor.gllvm.R
53641b2069cf7d335354c0936d71c380 *R/getResidualCov.gllvm.R
de71df2b0b10e6f8bf5d7388024b450a *R/gllvm.R
9c49ede1258393e97a38940af1e0ec33 *R/gllvm.TMB.R
b7394d27b0b9107113c4c387c449266b *R/gllvm.VA.R
b11fdffac010fdda0e2f83361d44754d *R/gllvm.auxiliary.R
9fb020226ae0c662e941067c0de757cd *R/gllvm.iter.R
55e644c9b93e77188e744210cf01df39 *R/gllvm.makeform.R
941262c51ab790c31c250d05fb3cdbd4 *R/goodnessOfFit.gllvm.R
97d8d2716cc8af45ae859d00afc20752 *R/logLik.gllvm.R
938757d90d84a4cc39b2260ee9535724 *R/ordiplot.gllvm.R
e9067269fc43e855887ec3faa3251175 *R/phyloplot.gllvm.R
a5a45bf5c3e9fc14855193dc98cff56d *R/plot.gllvm.R
1a7b23f9c1d39d84e2fd0c012a290c02 *R/plotVP.gllvm.R
b24634551d02494b16d94fee5d7f5388 *R/predict.gllvm.R
d05be8d3f11ae63de9ee779438facfef *R/predictLVs.gllvm.R
31b8a39dd8d75eff44da17bad68a9218 *R/print.gllvm.R
8f8d118e5066d1689753a53c25bc6a37 *R/randomCoefplot.R
8810ea29062c1d749ac43ce659affbf9 *R/residuals.gllvm.R
051f46171f4e1dd3b3c0ada487db8ba3 *R/se.gllvm.R
18988a4ff75c773375d62fa89d806cbf *R/simulate.gllvm.R
080d08647ec76536579db18f1dc51185 *R/summary.gllvm.R
837b2682dd67a89e793ae51a2bc4b9fd *R/update.gllvm.R
b18bceffc468525bbb86501fcd549f41 *R/vcov.gllvm.R
180163bebc98a2d870a92efe55dca540 *R/zzz.R
3bc3348424c441c8ab4e88239098f888 *README.md
84f33613f42edf885b5e0132df652179 *build/vignette.rds
4228a60426797ab36676d82835e4f3f9 *data/Skabbholmen.RData
421816a150522520b0de437569981123 *data/beetle.RData
0b52403097df6c9c69d2bda2f64fcb5f *data/eSpider.RData
2f8906852ab747a908c0dad52ecc0e25 *data/fungi.RData
6fea5996b880edd29eb63e89251ac6a8 *data/kelpforest.RData
c692bb7c67b7c0c0c7c3d404762cd056 *data/microbialdata.RData
d9f468fbc7bf234bfeed1ec47606760b *inst/CITATION
9bb1172b2ae7f89caa972d7a2650eb95 *inst/doc/vignette1.R
9c28609b86a7ce7d9f18980e7efda7e0 *inst/doc/vignette1.Rmd
7e37942a646433d176cf5cc15b16ce27 *inst/doc/vignette1.html
dfc96a76489635219f0456f9bbb303f8 *inst/doc/vignette2.R
2a241892bdad716ce94324240211c32a *inst/doc/vignette2.html
dca1e90d5e367326e4b69740a05f9177 *inst/doc/vignette2.rmd
c20703bb093ff58d5162d88c206e4848 *inst/doc/vignette3.R
fb39f77553273cb68d3d7e687a0b1a2d *inst/doc/vignette3.html
48f47803367c2443269c8520c97e96da *inst/doc/vignette3.rmd
83fc43865831f6da4d952dd6bcc21526 *inst/doc/vignette4.R
53e770a03ca12d3acedbbf96016e7c13 *inst/doc/vignette4.html
bf1ff17349f3e4ab4d5ae5f08b3d2642 *inst/doc/vignette4.rmd
90eaf117d86ef0cbfccfcab4fc604d80 *inst/doc/vignette5.R
486571a7550689f4e1a2977a4c378421 *inst/doc/vignette5.Rmd
9012233b4fe1ee150257cbf5093c9550 *inst/doc/vignette5.html
6222439ba78b75161b1037b3d36b46d2 *inst/doc/vignette6.Rmd
bcf0257107f4eda7b56ba04c8abe7d9e *inst/doc/vignette6.html
cb7e82b2b833d52e248a0e6d352f789a *inst/doc/vignette7.Rmd
f5fefbd90fc303664b7fc6651d07478e *inst/doc/vignette7.html
78ba3c6029088869457a9404eb27e427 *inst/doc/vignette8.R
26d341ce5c3672e9efc2c4194ff86f80 *inst/doc/vignette8.Rmd
a91fefdbcdf7e76dbf4bd04bddb63f1c *inst/doc/vignette8.html
335eed4922083236d6a6f06970101331 *inst/doc/vignette9.Rmd
5f466debdd465ca05ed41f827511b16d *inst/doc/vignette9.html
2525c883c23888d9498b40a578165260 *man/AICc.Rd
e7762eb8a3e0a9a4bc411e2d54df9e14 *man/Skabbholmen.Rd
ef3e6eea8af96f762c01734fe6ba9031 *man/VP.gllvm.Rd
a9cd906d313d707b136eccddc58863cd *man/anova.gllvm.Rd
c33f5643755f37b8094db3e61068e2ca *man/beetle.Rd
fc8b1c16af97ebd4297daace2b2c3e41 *man/coefplot.gllvm.Rd
8a765a5f1950fee59eda553209792625 *man/confint.gllvm.Rd
517b0d17579b177c5856952af251d400 *man/eSpider.Rd
46300a59e627f3095c1b84f68dff465c *man/ecoCoefs.Rd
1965d997f0f21be6e444444b04e8f26f *man/fungi.Rd
d07511ab298f410139927281329e8b34 *man/getEnvironCov.gllvm.Rd
9fbad237b5da56ab558cd2b013df1d84 *man/getLV.gllvm.Rd
971ecbb3e6d3aa0774c9f9dddffa33e7 *man/getLoadings.gllvm.Rd
294e096358fa06710d34ef6c2319a7e9 *man/getPredictErr.gllvm.Rd
d38feb8b5626dbd47cf53f6bd7bad1aa *man/getResidualCor.gllvm.Rd
080d7ab70bd6b193a34812417e20c124 *man/getResidualCov.gllvm.Rd
43a89e5449ee07ff2227008fde515718 *man/gllvm.Rd
02222bb1a7317ef0426bcb528df5f1dc *man/goodnessOfFit.Rd
cde79a34144de67990f7da5065913789 *man/kelpforest.Rd
185b83432cc31c632283ad80cc965f89 *man/logLik.gllvm.Rd
2470d8c88538b952fbfa39513771689f *man/microbialdata.rd
851e34a9c85f6d34e184b1f73e383741 *man/ordiplot.gllvm.Rd
0972f623c0d3ee413701331e6581cc02 *man/phyloplot.gllvm.Rd
dc4a26e130af06e9413d040c0376348b *man/plot.gllvm.Rd
2963cbb63ef26ab15babd5e99c70389e *man/predict.gllvm.Rd
8b749c8badb79a3f8719f39f36ac07d9 *man/predictLVs.gllvm.Rd
58722f159affe255506e16a67829f0fd *man/randomCoefplot.gllvm.Rd
04431fd97f6e670450a1de5a41765371 *man/residuals.gllvm.Rd
aa17747f6c377b3463c9761a17460552 *man/se.gllvm.Rd
16056ff35c6c0a2b11466f4e29e7e673 *man/simulate.gllvm.Rd
54c5161abd359bc5035fc2aa8c778401 *man/summary.gllvm.Rd
a4ce4b6165ed5d8212fdc512f82b0cfc *man/update.gllvm.Rd
d955ffc688cb97ab8016101a3f056afd *man/vcov.gllvm.Rd
b6da1018e8cc8791d459652629857d00 *src/Makevars
69387a546608d002e5775e4f3b45b4a4 *src/distrib.h
12e8dffe42124c84cdfc28cbd9dce8aa *src/gllvm.cpp
0d8a50fbbc1f9ceddfadaa02bff3698e *src/utils.h
f2cb2726455d8af109e4d5bdc15634e8 *tests/testthat.R
2898ad90ee325a555bb8ff4af834e893 *tests/testthat/test-fitgllvm.R
9fba62c66b7290706ad402a82f34564b *vignettes/F4.png
3a08f7262a57050562e5ed42b58435bd *vignettes/F4coef.png
98c64c3006156d65d94e62bbabe6f087 *vignettes/VP1-1.png
444c4475c3842c824933ae9bad5de1b8 *vignettes/VP2-1.png
00f5c192bbfdbe3918d497f2e905d046 *vignettes/Xcovar-1.png
c61a74073df1cbbdefc64be28f8d05ba *vignettes/bigplot-1.png
98bb8b344f9f5e25446bd8acc6a6063e *vignettes/coefsP-1.png
8c566388c710d052b90e53fae9a2332b *vignettes/corrplot-1.png
26f36a41d0b52234fe6a40dc3253a490 *vignettes/fit_4th.Rdata
374aa67e837344f2acd65f91053d0a87 *vignettes/fixuGLLVM-1.png
db2d3763ca905952ed0f3e1b87aad744 *vignettes/ftComTol.RData
6a6f3b0370b03d250ea99f0d463cf5aa *vignettes/ftEqTol.RData
7e4dd18c3568f4f190e2c54a6755354d *vignettes/ftNULL.RData
5032d23ea534f318066b390786b72052 *vignettes/ftNULLpois.RData
261cf52eb6cb3a3e9492a7a627c642b9 *vignettes/ftUneqTol.RData
dcd3fe97099d0119ec22a92739337c77 *vignettes/ftX.RData
0b2aa9dbaffad32e09d6b9dced17e9df *vignettes/ftXi.RData
06e1e55482bcb0a1bef0009cc8811ba7 *vignettes/ftXph.RData
aeebf3680f4f9bcf7b34fd5baeaf57cb *vignettes/lvAR-1.png
1a21453d8031df4798e1aad35b0669b7 *vignettes/ordip6_1-1.png
ba3e9ffa89814374a41546841875612e *vignettes/ordip6_3-1.png
c1f2487e67eb783b77fe975bb5aff070 *vignettes/ordiplot1-1.png
3112eccbe58b7f298f3d68f06c8fa5df *vignettes/plotrow-1.png
ca7750290eb9917a83d7db51ef729a89 *vignettes/rcoefs-1.png
8b12627e212ce01a78370398431b789d *vignettes/specord-1.png
9c28609b86a7ce7d9f18980e7efda7e0 *vignettes/vignette1.Rmd
dca1e90d5e367326e4b69740a05f9177 *vignettes/vignette2.rmd
48f47803367c2443269c8520c97e96da *vignettes/vignette3.rmd
bf1ff17349f3e4ab4d5ae5f08b3d2642 *vignettes/vignette4.rmd
486571a7550689f4e1a2977a4c378421 *vignettes/vignette5.Rmd
6222439ba78b75161b1037b3d36b46d2 *vignettes/vignette6.Rmd
cb7e82b2b833d52e248a0e6d352f789a *vignettes/vignette7.Rmd
26d341ce5c3672e9efc2c4194ff86f80 *vignettes/vignette8.Rmd
335eed4922083236d6a6f06970101331 *vignettes/vignette9.Rmd
