f7331a599bbc1494e4ecbf689457913e *DESCRIPTION
4c2519d576e0c8920b623ca7a70ae079 *LICENSE
0ed3ec7b751d9405ec6917075a106c6c *NAMESPACE
f89be4b73c614bd49dc9d5392f14b134 *R/SNPfiltR.R
5f3abfa18df14eca94a076a202bcb17a *R/assess_missing_data_pca.R
68cfb445ac9dbf8219d406a7dae9b69a *R/assess_missing_data_tsne.R
e7da2def8f7fd41ff12f2e13f69b9ff1 *R/distance_thin.R
99327f960e7727e1254357f1a46ea3ae *R/example_data.R
7cdbabdb10ca4d2ad525b3dbc0ab3866 *R/filter_allele_balance.R
6837203241490d428e150f629ddf309b *R/filter_biallelic.R
6271e3c702cb8e38dbf9a794a0d894bc *R/hard_filter.R
ace31d7dc3a2582efba758d683f44915 *R/max_depth.R
df3feb3fc96a7fbe8f1beaa673532c15 *R/min_mac.R
d29239ef8c44f899c13839df2939c420 *R/missing_by_sample.R
74ebc124cc51c028a3000353ea0140f1 *R/missing_by_snp.R
4ecf1d959e593ccf60cbefa0525bbe53 *R/zzz.R
d87241a679c91d318787fa0f9cf99c92 *README.md
c73b990c3b0998130e64618243b05834 *build/vignette.rds
dd80dc03b72202e90c8e87f709c0c23b *data/popmap.rda
f003e8abb4eda2529672b98fe2a67b30 *data/vcfR.example.rda
96004b1cd55f5c5d277cd627e0cf040e *inst/doc/reproducible-vignette.R
1092484225fc9e49ac9326a3698073f0 *inst/doc/reproducible-vignette.Rmd
4bb527ef28ecc55cd6462b325bdaa404 *inst/doc/reproducible-vignette.html
515ce9bb43f815173fdfe7429e5fbb9a *inst/extdata/RMarkdown.qc.submit.script.sh
8395e392d256a584c1df3d12245c7eb6 *inst/extdata/fastqcr.Rmd
6f7e5e13388d192a3300f3e0adabf9b6 *inst/extdata/make.benchmarking.vcfs.R
8db4419c8b1a3267810f641f39d6409e *inst/extdata/make.toy.vcfR.dataset.R
5eea73ff0c90aa1161a4c72492be61a4 *inst/extdata/rhub.check.package.R
b284e90a6053cefd380ee93e5fc67777 *man/SNPfiltR.Rd
b5bd3c60212b52af72eccb528d13c0a8 *man/assess_missing_data_pca.Rd
5aed26c7b296102e8365896474892905 *man/assess_missing_data_tsne.Rd
68e5ffae6f76c29dad53b9f0d7fb6259 *man/distance_thin.Rd
46c673b0c1989b61e35673be660fa8d7 *man/figures/make.logo.R
d048ac0c85a3332c0c42eb0ce438d4e2 *man/filter_allele_balance.Rd
e38c25279156382610ab879d28ae496e *man/filter_biallelic.Rd
ea6d9f3faab627c26d16b721d15d0fca *man/hard_filter.Rd
4670661c6b3b8476578549b5f46652ca *man/max_depth.Rd
99c52acfb18bc6263141a1e360835ac5 *man/min_mac.Rd
752513d7345fd9455222ce924b324c8d *man/missing_by_sample.Rd
a844e61af33968b856f5b433580342a1 *man/missing_by_snp.Rd
34504c2cc4722d767bb3c179c1693e4c *man/popmap.Rd
6adaf9ad816e2e298158f033c1f8d2c9 *man/vcfR.example.Rd
5d6e76fc8aa761af7a34bbd57b505ca9 *tests/testthat/test-allele_balance.R
3e532dc417bb47f04d3b9910231dc385 *tests/testthat/test-assess_missing_data_pca.R
ba848b45e875c58e6826e02356b76a5e *tests/testthat/test-assess_missing_data_tsne.R
da62e011b5105386b733a295e17070b6 *tests/testthat/test-distance_thin.R
c5551caeb5b8995b453f51c70c6678d0 *tests/testthat/test-filter_biallelic.R
fda52ef4568c0fdbe7f46edb58832c71 *tests/testthat/test-hard_filter.R
1dfa6964bb86c4465fedcdd346e74a88 *tests/testthat/test-max_depth.R
07738c84966d65d7b51c40f8ccb36225 *tests/testthat/test-min_mac.R
d4809c4eddf3bc9c438063d80e169988 *tests/testthat/test-missing_by_sample.R
deacce638a8c3196979122f222ae552e *tests/testthat/test-missing_by_snp.R
688bd97e14d0d5a9f3d1eaae5ba21c97 *tests/testthat/testthat.R
1092484225fc9e49ac9326a3698073f0 *vignettes/reproducible-vignette.Rmd
