9dc80c90359dd66e5dfe1ee7a67ce7f4 *DESCRIPTION
e3d950d32762a7f84e159647c43c71c4 *LICENSE
28aa22f5b4b9ec648ab68639365ee3b3 *NAMESPACE
4e4d176182532a348bb5ef2e583741e1 *NEWS.md
df6cc46bc7fae1a55b713f3d5065b35a *R/Pv3Rs-package.R
267a59cd85a266cdf960961326bd6005 *R/RG_inference.R
c32d12c68723140d444cab3472c2495d *R/RG_to_igraph.R
7a91c50a1a2d4ff15b2f1a19a05d629c *R/compute_posterior.R
29b44a344831fc96077b197926885023 *R/data.R
6486ea24e966152a5b335d7a22edc769 *R/determine_MOIs.R
efb0fa133c7d30a8c85447dba03c2389 *R/enumerate_CPs.R
b3b6ce03eb120d942f5505c37a1da47c *R/enumerate_IPs_RG.R
327a0cf8bc56caf048078d0e228eef61 *R/enumerate_RGs.R
4b3b4d6c6a74b0788783f1f9c5a80743 *R/enumerate_alleles.R
3b04ae57c340da4d21f07e63abd4d4ac *R/helpers.R
8e76d041fc35c7d8cb93ff0d3867fb2c *R/plot_RG.R
54d85677c9cb73f008f3be0b4d029e01 *R/plot_data.R
6ebb5f7a02ce624ef1e381450e9279c8 *R/plot_simplex.R
1d9a17402a6bae288e5cd5a311de3e03 *R/recombine_parent_ids.R
16945345071bead0df8c29d551954418 *R/sample_RG.R
e0593f5b0b08a0a87fd75c16aa0f88b9 *README.md
88d79cbcf1de42b7ff44261581f4a9fa *build/partial.rdb
acc69f63c636be18ef160080faff6033 *build/vignette.rds
a64d1cd00747e4f6a45199bf42e11c5a *data/fs_VHX_BPD.rda
cd394f8561f4e1abe0b22b691e192d7a *data/ys_VHX_BPD.rda
3dd85ee2b6b2139e993fd8ac67721832 *inst/doc/demonstrate-usage.R
ad1b26f59bd2cc437df1eed288780ecc *inst/doc/demonstrate-usage.Rmd
0ec032ed7f038a19c626c77549fecfe6 *inst/doc/demonstrate-usage.html
a35c03f3b1ed155c179e90b488fcea26 *man/Pv3Rs-package.Rd
a148c2e9f9275259ec416b7f5fc66a1d *man/RG_to_igraph.Rd
32d49bceea07762a77a402d979be46c2 *man/compute_posterior.Rd
ed40f0131ab687373e62375801e245e7 *man/determine_MOIs.Rd
da7f9f89cd63d22bf59800d9ce3a8029 *man/enumerate_RGs.Rd
cade97b9962db8e80808a939ca3bcd48 *man/figures/logo.png
bb68791c970fccf0c020b2d8dcf01c0b *man/fs_VHX_BPD.Rd
661748f15ecedba55d2402640372e248 *man/macros/macros.Rd
614e6bd8697b639766b588d172ac3b87 *man/plot_RG.Rd
9104e390322daf0baf334933f750b295 *man/plot_data.Rd
44121746359c6606b91e1ee65754f3ab *man/plot_simplex.Rd
98ef4350f3aa8681fa71001f617f7ae6 *man/project2D.Rd
0d32da7c734f735d0e70c0fb746feb05 *man/sample_RG.Rd
4ea0867147a150932f383db37392d57a *man/ys_VHX_BPD.Rd
532ef249c74e9acaeb621574b398c164 *tests/testthat.R
5a0f02778f6f0322eaa0f262a6a8fccf *tests/testthat/test-compute_posterior.R
ad1b26f59bd2cc437df1eed288780ecc *vignettes/demonstrate-usage.Rmd
