as.list,covTP-method    Coerce a 'covTP' Object into a List
checkGrad               Check the Gradient Provided in a 'covMan'
                        Object
checkPar                Check Length and Names of a Vector of Values
                        for Parameters or Bounds
checkX                  Generic function: Check the Compatibility of a
                        Design Matrix with a Given Covariance Object
checkX,covAll-method    Check the Compatibility of a Design with a
                        Given Covariance Object
coef,methods            Extract Coefficients of a Covariance Kernel
                        Object as Vector, List or Matrix
coef<-                  Generic Function: Replacement of Coefficient
                        Values
coefLower               Extract or Set Lower/Upper Bounds on
                        Coefficients
contr.helmod            Modified Helmert Contrast Matrix
corLevCompSymm          Correlation Matrix for the Compound Symmetry
                        Structure
corLevDiag              Correlation or Covariance Matrix for a Diagonal
                        Structure
corLevLowRank           Correlation Matrix for a Low-Rank Structure
corLevSymm              Correlation Matrix for a General Symmetric
                        Correlation Structure
covANOVA                Creator for the Class '"covANOVA"'
covANOVA-class          Class '"covANOVA"'
covAll-class            Virtual Class '"covAll"'
covComp                 Creator for the Class '"covComp"' for Composite
                        Covariance Kernels
covComp-class           Class '"covComp"'
covMan                  Creator Function for 'covMan' Objects
covMan-class            Class '"covMan"'
covMat                  Generic Function: Covariance or
                        Cross-Covariance Matrix Between two Sets of
                        Locations
covMat,covMan-method    Covariance Matrix for a Covariance Kernel
                        Object
covOrd                  Warping-Based Covariance for an Ordinal Input
covOrd-class            Class '"covOrd"'
covQual-class           Class '"covQual"'
covQualNested           Nested Qualitative Covariance
covQualNested-class     Class '"covQualNested"'
covRadial               Creator for the Class '"covRadial"'
covRadial-class         Class '"covRadial"'
covTP                   Creator for the Class '"covTP"'
covTP-class             Class '"covTP"'
covTS                   Creator Function for 'covTS' Objects
covTS-class             Class '"covTS"'
gls                     Generic Function: Generalized Least Squares
                        Estimation with a Given Covariance Kernel
gls-methods             Generalized Least Squares Estimation with a
                        Given Covariance Kernel
gp                      Gaussian Process Model
hasGrad                 Generic Function: Extract slot hasGrad of a
                        Covariance Kernel
influence.gp            Diagnostics for a Gaussian Process Model, Based
                        on Leave-One-Out
inputNames              Generic Function: Names of the Inputs of a
                        Covariance Kernel
k1Exp                   Predefined covMan Objects for 1D Kernels
k1FunExp                One-Dimensional Classical Covariance Kernel
                        Functions
kGauss                  Gauss (Squared-Exponential) Kernel
kMatern                 Matérn Kernels
kergp-package           Gaussian Process Laboratory
kernelName              Name of the One-Dimensional Kernel in a
                        Composite Kernel Object
mle                     Generic Function: Maximum Likelihood Estimation
                        of a Gaussian Process Model
mle-methods             Maximum Likelihood Estimation of Gaussian
                        Process Model Parameters
npar                    Generic function: Number of Free Parameters in
                        a Covariance Kernel
npar,covMan-method      Number of Parameters for a Covariance Kernel
                        Object
optimMethods            Optimization Methods (or Algorithms) for the
                        'mle' Method
parMap                  Generic Function: Map the Parameters of a
                        Composite Covariance Kernel
parMap,covTS-method     Map the Parameters of a Structure on the Inputs
                        and Kernel Parameters
parNamesSymm            Vector of Names for the General 'Symm'
                        Parameterisation
parseCovFormula         Parse a Formula or Expression Describing a
                        Composite Covariance Kernel
plot                    Plot for a qualitative input
plot.gp                 Diagnostic Plot for the Validation of a 'gp'
                        Object
plot.simulate.gp        Plot Simulations from a 'gp' Object
predict.gp              Prediction Method for the '"gp"' S3 Class
prinKrige               Principal Kriging Functions
q1CompSymm              Qualitative Correlation or Covariance Kernel
                        with one Input and Compound Symmetric
                        Correlation
q1Diag                  Qualitative Correlation or Covariance Kernel
                        with one Input and Diagonal Structure
q1LowRank               Qualitative Correlation or Covariance Kernel
                        with one Input and Low-Rank Correlation
q1Symm                  Qualitative Correlation or Covariance Kernel
                        with one Input and General Symmetric
                        Correlation
scores                  Generic Function: Scores for a Covariance
                        Kernel Object
shapeSlot               Extracts the Slots of a Structure
simulPar                Generic function: Draw Random Values for the
                        Parameters of a Covariance Kernel
simulPar,covAll-method
                        Draw Random Values for the Parameters of a
                        Covariance Kernel
simulate,covAll-method
                        Simulation of a 'covAll' Object
simulate.gp             Simulation of Paths from a 'gp' Object
symIndices              Vector of Indices Useful for Symmetric or
                        Anti-Symmetric Matrices.
translude               Make Translucent colors
varVec                  Generic Function: Variance of Gaussian Process
                        at Specific Locations
varVec,covMan-method    Covariance Matrix for a Covariance Kernel
                        Object
warpNorm                Warpings for Ordinal Inputs
